Protein Information

Protein ZmbHLH49
ZmbHLH49 is a protein in the bHLH family.
Information
TF Name:	ZmbHLH49
Species:	Maize
TF Family:	bHLH
Gene Name(Synonym):	BHLH49
Uniprot ID:	A0A1D6PDQ1
Subgenome:	1

ZmbHLH49 is a protein in the bHLH family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
	PF00010
Zm00001eb002350_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Gene ID	Type	Sequence	FIMO	Position
Zm00001d027496	DAPseq	sequence	fimo	position
Zm00001d027496	DAPseq	sequence	fimo	position
Zm00001d027496	ChIPseq	sequence	fimo	position
Zm00001d027496	PChIPseq	sequence	fimo	position

Interactions where ZmbHLH49 is the regulator

There are no protein-dna interactions that fit this criteria.

Interactions where ZmbHLH49 is the target
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There are 76 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb002350_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MALSFHTTTAPLFGHRIPAPDMSFLHDDFHSEVTDALLGFVYDPLDASNAALDDLLGLPPSDDAAFLAPIDGATEAKWQC
GKRQRIGGGNQQVPALAAAPMIDEFVLPLPVPLPLPQPPPPAAPLLPVPVPVPTQVPEPVVFVRGADGNKAGGACQSVQN
SAARQRRKRISEKTAELARLIPGANKLNTAEMLEEASRHVKLLQAQVGMLALMRAAGSSEDDKMPSAITAQERMHALLAC
GSVQERLAAEGRCLVPTSLVDAVAKDYAVVKGNPVVRRDLG

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00010
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Nucleotide Sequence
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CTTGACTCCCGGTCTTGCCCTGACA...

GRMZM2G137374_T01 from maize genome v3

Related TFome: pUT4110

Amino Acid Sequence
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Nucleotide Sequence
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GCCTCCTCCAGTCCTCCCTCTCCTC...

Zm00001d027496_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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ATGGCGCTCAGCTTCCACACGACAA...

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Protein ZmbHLH49

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmbHLH49 is the regulator

Interactions where ZmbHLH49 is the target
Expand

Zm00001eb002350_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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Expand

GRMZM2G137374_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Expand

Zm00001d027496_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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Expand

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